The LONI Pipeline Web Start (PWS) allows users to start the LONI Pipeline application directly from the web browser and run it locally without any installation. It has all the features and functionality of the downloadable stand-alone Pipeline application and allows anonymous guest access or user-authentication to connect to remote Pipeline servers.
Click the button below to launch the Pipeline Web Start
The examples below will launch the PWS client, load specific predefined workflow protocols, and submit workflows to a dedicated LONI Pipeline server using guest privileges.
Neuro Imaging
| AIR: Automated Image Registration | |
| SVPASEG: Sub-Volume Probabilistic Atlas Segmentation |
Bioinformatics and Genomics
| MAQ, SAMTools, Bowtie (Integrated) | |
| miBLAST: Basic Local Alignment Search Tool |
Notes
- Java version 1.5 or higher is required.
- Because of differences in browser architectures and user preferences, once the PWS is started, you may have to double-click the downloaded JNLP file if it doesn’t start automatically.
- You have to allow access when it asks for permission to run on your computer.
For more information on the LONI Pipeline application, please check our Quick Start Guide and User Guide.
